Browse of TCMCG007C39349 protein

CDS

Accession Number	TCMCG007C39349
gbkey	CDS
Protein Id	XP_009151293.1
Location	complement(join(23556226..23556285,23556372..23556492,23556575..23557422,23557505..23557556,23557642..23557713,23557803..23557906,23557987..23558034,23558103..23558219,23558308..23558376,23558464..23558571,23558645..23558713,23558789..23559199))
Gene	LOC103874616
GeneID	103874616
Organism	Brassica rapa

Protein

Length	692aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009153045.3
Definition	DNA-directed RNA polymerase III subunit RPC5 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Sin-like protein conserved region
KEGG_TC	-
KEGG_Module	M00181        [VIEW IN KEGG]
KEGG_Reaction	R00435        [VIEW IN KEGG] R00441        [VIEW IN KEGG] R00442        [VIEW IN KEGG] R00443        [VIEW IN KEGG]
KEGG_rclass	RC02795        [VIEW IN KEGG]
BRITE	br01611        [VIEW IN KEGG] ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14721        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko00230        [VIEW IN KEGG] ko00240        [VIEW IN KEGG] ko03020        [VIEW IN KEGG] ko04623        [VIEW IN KEGG] ko05169        [VIEW IN KEGG] map00230        [VIEW IN KEGG] map00240        [VIEW IN KEGG] map03020        [VIEW IN KEGG] map04623        [VIEW IN KEGG] map05169        [VIEW IN KEGG]
GOs	GO:0000428        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005666        [VIEW IN EMBL-EBI] GO:0030880        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044451        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0055029        [VIEW IN EMBL-EBI] GO:0061695        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:1902494        [VIEW IN EMBL-EBI] GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGACTTTGATGACGAAGACAAGCCAAAAGAGGTCCCCAAAGCCAGGAGGTTTGCTCCTGGCCGTGCTGGGAAGCCCAAACCCAAACCTAAACCCGAACCAACTGCTTCGGAGAAAGCTGAGCCGTCTTCACAAACCGAGTCTGTGAGCAAGAGTGAGCACGACGTCGATGCCACCAAAGTCTCTGACCATCCCAAGGTTGAGCCTGAGGTCTTCAATGGCGCTGTTAAGATGGAGATTGATGCAAAAGTGGACAAGGAGCCGGAGACTACGGAGGTTGAGTTGATGGAGGAAGATCATCATCAGCTTCCACTGCATCAGGAGGAGGAGAAGGAGAAGGAGAAGGAAGAAGACGTTGTTGTTCGTGAAATTGACGTTTTCTTTAATCCCTCTATTGATGCCAACACTAAGCTTTATGTTCTACAATATCCTCTAAGACCGTCTTGGCGTGCTTACGAAATGGATGAACGGTGTGAAGAAGTTAGAGTGAATCCTTCTACCTCCCAGGTGGAGATTGATTTGTCTATGGATGTTCATTCGAGCAACTATGACCCTGACTTTGGAAGTAAACTACGTATGACTAAACAGACATTGACAACAACATGGAAGCAGCCTCCTACTTTGGATTATGCTGTTGGGGTTCTTTCAGGTGATAAGTTACACTTGAACCCTGTTCATGCTGTTGTTCAGCTCCGACCTTCTATGCAGTATCTTTCTTCCAAAAAGAATCAAGCAGAAGCTACCGAAGAATCTGCCGGAACTTCAAAAAGACAGAACAAGGGAGCGCAGGCTTCAACGGATCAGAAACCAGTTCCTGAAGAATGGGTTTCACTCAAGTATCATGGACTCCAATCCGAATATTGCTCCAGATACCTTAGCGGAATGATGGCTAATGGCACCTCTTCAATAGACTTCAACATGACCCCCGATGCTTATATCAACTCACTGTGCCGTGGAGATAACAGCAGAAACTCTGAGTCAAAAAGTTTATCAAAAAGGTTATTGGCCTCCCTACCGCTTGAAGAACGTCTGCAAACGTTGCTCTGCCAGAAACAGGGACCACCGTTATTTCGATACAGTGTTCTGAAGCACTACGCCCCAGAGTTATCAGACGAGGAGTTCTTAAAGGTCCTCCAGCAATACGCCTGTCTAGTTCAAGGCCTATGGACTCCCAAAACCAGGCTACTAAAGCTAGACGGCTTGGAAGGTTTCAGAGACTACGTCCTGTCCCTTTTCAGCCAGCGTCTAACCATAAAGTACTCCGAAGTTAAAGCAAGTCGCTATGCCGACAAGATCAAAACCATGTTGAATGTATTCGCCAAAGAACGGCCGTTGCTATGTGATTGGAAGTTCAAAGAGCCCACCGATGTCTCCTTCATCAAATCCCACAAGAAGATTGCAGAGGAGCAAGCAAGTTTCTGGAAGGGTATGGAAGAGAAGTTGCAGCCAAAGATAATACAAGGAGGTAAAGGTAGAGGGGGTGATAGTAACTTGAGGAATGCTGTAGGAAAAAATAATCCTTCAGCTACTACAGCTAAACAAGAGGTCGCAGCAGCAACGGTCTCTGAGGTAGGAGGAAGTTCGAGAAGTGCTATACCTCGTGTCCCTAGACAGAAGATGCCTGATGAGATCAAGAGGGCGATACCAAAGGCCTTGAAGAAGGTGTTTCAGACGCAGAAAGTTTGCAGCTACGAGACGATTTGCCAGAGACTTAGGGATCTTGCGGTTGCTACTTCGAATAATCCGAGAGTTGATTCAGGGATGGCGCAGCAGGTGGCGTTGGCTGTGGATTCTTACCAAGAGGAGCTTCGAGTCGTTATCAGTGAAGTGACTGTTGATATTCACGGCTCTTTTGTCTCCAAGTCGTCTCAAGACCATCCAGAATATGATCCACTAAGGGACGTGGTGATCAATCTCTTACTCGGGAATCCACCTGGTGCGAAGATTATGAAAGCTGATGTGTTTGCAGCAGGCAGGAGCATACTTGGACGTGAAATCACCAATAATGAATACCAAAAGGTGATGCACGACCTCTGTGAAACCCACTCTTCAGGATGGGTGTTACAGAAAGCTCGTTGA

Protein:   MDFDDEDKPKEVPKARRFAPGRAGKPKPKPKPEPTASEKAEPSSQTESVSKSEHDVDATKVSDHPKVEPEVFNGAVKMEIDAKVDKEPETTEVELMEEDHHQLPLHQEEEKEKEKEEDVVVREIDVFFNPSIDANTKLYVLQYPLRPSWRAYEMDERCEEVRVNPSTSQVEIDLSMDVHSSNYDPDFGSKLRMTKQTLTTTWKQPPTLDYAVGVLSGDKLHLNPVHAVVQLRPSMQYLSSKKNQAEATEESAGTSKRQNKGAQASTDQKPVPEEWVSLKYHGLQSEYCSRYLSGMMANGTSSIDFNMTPDAYINSLCRGDNSRNSESKSLSKRLLASLPLEERLQTLLCQKQGPPLFRYSVLKHYAPELSDEEFLKVLQQYACLVQGLWTPKTRLLKLDGLEGFRDYVLSLFSQRLTIKYSEVKASRYADKIKTMLNVFAKERPLLCDWKFKEPTDVSFIKSHKKIAEEQASFWKGMEEKLQPKIIQGGKGRGGDSNLRNAVGKNNPSATTAKQEVAAATVSEVGGSSRSAIPRVPRQKMPDEIKRAIPKALKKVFQTQKVCSYETICQRLRDLAVATSNNPRVDSGMAQQVALAVDSYQEELRVVISEVTVDIHGSFVSKSSQDHPEYDPLRDVVINLLLGNPPGAKIMKADVFAAGRSILGREITNNEYQKVMHDLCETHSSGWVLQKAR